Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DRAP01903 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HLA-DRAP01903 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
HLA-DRAP01903 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 AC092183.1-201ENST00000469884 875 ntBASIC17.29■□□□□ 0.36
HLA-DRAP01903 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DRAP01903 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.29■□□□□ 0.36
HLA-DRAP01903 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 AP003680.1-201ENST00000598970 3660 ntBASIC17.28■□□□□ 0.36
HLA-DRAP01903 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 AC051619.7-201ENST00000568314 623 ntBASIC17.28■□□□□ 0.36
HLA-DRAP01903 AC015911.4-201ENST00000588022 1070 ntBASIC17.28■□□□□ 0.36
HLA-DRAP01903 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 KRT8P37-201ENST00000451609 1420 ntBASIC17.28■□□□□ 0.36
HLA-DRAP01903 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.28■□□□□ 0.36
HLA-DRAP01903 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DRAP01903 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DRAP01903 AP005117.1-202ENST00000581724 1908 ntBASIC17.27■□□□□ 0.36
HLA-DRAP01903 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DRAP01903 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DRAP01903 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms