Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.9□□□□□ -0.02
IDH3BO43837 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.9□□□□□ -0.02
IDH3BO43837 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.9□□□□□ -0.02
IDH3BO43837 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.9□□□□□ -0.02
IDH3BO43837 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.9□□□□□ -0.02
IDH3BO43837 PGM5P2-202ENST00000637225 1043 ntBASIC14.9□□□□□ -0.02
IDH3BO43837 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
IDH3BO43837 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
IDH3BO43837 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.9□□□□□ -0.02
IDH3BO43837 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.9□□□□□ -0.02
IDH3BO43837 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.9□□□□□ -0.02
IDH3BO43837 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.9□□□□□ -0.02
IDH3BO43837 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.9□□□□□ -0.02
IDH3BO43837 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
IDH3BO43837 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.9□□□□□ -0.02
IDH3BO43837 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.9□□□□□ -0.02
IDH3BO43837 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.9□□□□□ -0.02
IDH3BO43837 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.89□□□□□ -0.03
IDH3BO43837 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
IDH3BO43837 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.89□□□□□ -0.03
IDH3BO43837 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.89□□□□□ -0.03
IDH3BO43837 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.89□□□□□ -0.03
IDH3BO43837 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
IDH3BO43837 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.89□□□□□ -0.03
IDH3BO43837 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.89□□□□□ -0.03
IDH3BO43837 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC14.89□□□□□ -0.03
IDH3BO43837 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.89□□□□□ -0.03
IDH3BO43837 MIR1224-201ENST00000408193 85 ntBASIC14.89□□□□□ -0.03
IDH3BO43837 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.89□□□□□ -0.03
IDH3BO43837 AF238378.1-201ENST00000526806 358 ntBASIC14.89□□□□□ -0.03
IDH3BO43837 MIR1199-201ENST00000621445 119 ntBASIC14.89□□□□□ -0.03
IDH3BO43837 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.89□□□□□ -0.03
IDH3BO43837 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.89□□□□□ -0.03
IDH3BO43837 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
IDH3BO43837 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
IDH3BO43837 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.89□□□□□ -0.03
IDH3BO43837 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.89□□□□□ -0.03
IDH3BO43837 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
IDH3BO43837 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 AL603832.2-201ENST00000566195 2125 ntBASIC14.89□□□□□ -0.03
IDH3BO43837 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
IDH3BO43837 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
IDH3BO43837 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
IDH3BO43837 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
IDH3BO43837 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
IDH3BO43837 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IDH3BO43837 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
IDH3BO43837 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
IDH3BO43837 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IDH3BO43837 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.88□□□□□ -0.03
IDH3BO43837 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IDH3BO43837 AC013268.4-201ENST00000637413 2228 ntBASIC14.88□□□□□ -0.03
IDH3BO43837 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
IDH3BO43837 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.88□□□□□ -0.03
IDH3BO43837 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
IDH3BO43837 AKR1C7P-201ENST00000305623 895 ntBASIC14.88□□□□□ -0.03
IDH3BO43837 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.88□□□□□ -0.03
IDH3BO43837 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IDH3BO43837 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IDH3BO43837 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
IDH3BO43837 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.88□□□□□ -0.03
IDH3BO43837 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.88□□□□□ -0.03
IDH3BO43837 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.88□□□□□ -0.03
IDH3BO43837 AC073648.2-201ENST00000510116 352 ntBASIC14.88□□□□□ -0.03
IDH3BO43837 IGHV3-65-201ENST00000523210 341 ntBASIC14.88□□□□□ -0.03
IDH3BO43837 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.88□□□□□ -0.03
IDH3BO43837 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.88□□□□□ -0.03
IDH3BO43837 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.88□□□□□ -0.03
IDH3BO43837 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
IDH3BO43837 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
IDH3BO43837 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms