Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
ITM2AO43736 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITM2AO43736 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITM2AO43736 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITM2AO43736 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITM2AO43736 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITM2AO43736 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.84■□□□□ 0.13
ITM2AO43736 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITM2AO43736 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
ITM2AO43736 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
ITM2AO43736 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.84■□□□□ 0.13
ITM2AO43736 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
ITM2AO43736 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ITM2AO43736 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
ITM2AO43736 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.83■□□□□ 0.13
ITM2AO43736 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ITM2AO43736 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
ITM2AO43736 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
ITM2AO43736 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.83■□□□□ 0.13
ITM2AO43736 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
ITM2AO43736 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
ITM2AO43736 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
ITM2AO43736 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.83■□□□□ 0.12
ITM2AO43736 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
ITM2AO43736 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.83■□□□□ 0.12
ITM2AO43736 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
ITM2AO43736 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
ITM2AO43736 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.83■□□□□ 0.12
ITM2AO43736 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 HCG4P8-203ENST00000443049 980 ntBASIC15.83■□□□□ 0.12
ITM2AO43736 CXCL1P1-201ENST00000502804 216 ntBASIC15.83■□□□□ 0.12
ITM2AO43736 RNPS1P1-201ENST00000507437 918 ntBASIC15.83■□□□□ 0.12
ITM2AO43736 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.83■□□□□ 0.12
ITM2AO43736 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.83■□□□□ 0.12
ITM2AO43736 AC105339.3-201ENST00000560043 636 ntBASIC15.83■□□□□ 0.12
ITM2AO43736 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.83■□□□□ 0.12
ITM2AO43736 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.83■□□□□ 0.12
ITM2AO43736 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.83■□□□□ 0.12
ITM2AO43736 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
ITM2AO43736 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.12
ITM2AO43736 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
ITM2AO43736 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.82■□□□□ 0.12
ITM2AO43736 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.82■□□□□ 0.12
ITM2AO43736 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
ITM2AO43736 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
ITM2AO43736 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.82■□□□□ 0.12
ITM2AO43736 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.82■□□□□ 0.12
ITM2AO43736 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
ITM2AO43736 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.82■□□□□ 0.12
ITM2AO43736 RNF146-204ENST00000476956 884 ntTSL 2 BASIC15.82■□□□□ 0.12
ITM2AO43736 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 AL031432.2-201ENST00000566714 459 ntBASIC15.82■□□□□ 0.12
ITM2AO43736 AL928711.1-201ENST00000570165 459 ntBASIC15.82■□□□□ 0.12
ITM2AO43736 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.82■□□□□ 0.12
ITM2AO43736 AL445228.2-201ENST00000605589 952 ntBASIC15.82■□□□□ 0.12
ITM2AO43736 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.82■□□□□ 0.12
ITM2AO43736 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.82■□□□□ 0.12
ITM2AO43736 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
ITM2AO43736 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.82■□□□□ 0.12
ITM2AO43736 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.82■□□□□ 0.12
ITM2AO43736 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.82■□□□□ 0.12
ITM2AO43736 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.82■□□□□ 0.12
ITM2AO43736 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
ITM2AO43736 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITM2AO43736 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITM2AO43736 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
ITM2AO43736 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITM2AO43736 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
ITM2AO43736 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms