Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ACTN4O43707 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
ACTN4O43707 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ACTN4O43707 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ACTN4O43707 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ACTN4O43707 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
ACTN4O43707 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.07■□□□□ 0.48
ACTN4O43707 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
ACTN4O43707 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
ACTN4O43707 AC018892.3-201ENST00000623986 2499 ntBASIC18.06■□□□□ 0.48
ACTN4O43707 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC18.06■□□□□ 0.48
ACTN4O43707 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 BNIP3P1-202ENST00000550043 1585 ntBASIC18.06■□□□□ 0.48
ACTN4O43707 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 MIR346-201ENST00000362234 95 ntBASIC18.06■□□□□ 0.48
ACTN4O43707 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ACTN4O43707 MCCD1P2-201ENST00000423228 335 ntBASIC18.06■□□□□ 0.48
ACTN4O43707 SPCS2P4-201ENST00000436160 681 ntBASIC18.06■□□□□ 0.48
ACTN4O43707 KRT8P48-201ENST00000515599 1220 ntBASIC18.06■□□□□ 0.48
ACTN4O43707 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.06■□□□□ 0.48
ACTN4O43707 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.06■□□□□ 0.48
ACTN4O43707 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.06■□□□□ 0.48
ACTN4O43707 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.06■□□□□ 0.48
ACTN4O43707 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.06■□□□□ 0.48
ACTN4O43707 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.06■□□□□ 0.48
ACTN4O43707 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.06■□□□□ 0.48
ACTN4O43707 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.06■□□□□ 0.48
ACTN4O43707 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
ACTN4O43707 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.06■□□□□ 0.48
ACTN4O43707 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.06■□□□□ 0.48
ACTN4O43707 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ACTN4O43707 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ACTN4O43707 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.06■□□□□ 0.48
ACTN4O43707 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ACTN4O43707 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.06■□□□□ 0.48
ACTN4O43707 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
ACTN4O43707 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.06■□□□□ 0.48
ACTN4O43707 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.06■□□□□ 0.48
ACTN4O43707 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ACTN4O43707 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ACTN4O43707 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
ACTN4O43707 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.05■□□□□ 0.48
ACTN4O43707 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ACTN4O43707 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 NEK7-201ENST00000367383 586 ntTSL 2 BASIC18.05■□□□□ 0.48
ACTN4O43707 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.05■□□□□ 0.48
ACTN4O43707 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.05■□□□□ 0.48
ACTN4O43707 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.05■□□□□ 0.48
ACTN4O43707 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.05■□□□□ 0.48
ACTN4O43707 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC18.05■□□□□ 0.48
ACTN4O43707 AP000842.3-202ENST00000569238 1080 ntBASIC18.05■□□□□ 0.48
ACTN4O43707 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.05■□□□□ 0.48
ACTN4O43707 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.05■□□□□ 0.48
ACTN4O43707 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
ACTN4O43707 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ACTN4O43707 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ACTN4O43707 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC18.05■□□□□ 0.48
ACTN4O43707 GSN-206ENST00000394353 2311 ntTSL 2 BASIC18.05■□□□□ 0.48
ACTN4O43707 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC18.05■□□□□ 0.48
ACTN4O43707 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
ACTN4O43707 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
ACTN4O43707 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.05■□□□□ 0.48
ACTN4O43707 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.05■□□□□ 0.48
ACTN4O43707 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.05■□□□□ 0.48
ACTN4O43707 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ACTN4O43707 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.04■□□□□ 0.48
ACTN4O43707 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.04■□□□□ 0.48
ACTN4O43707 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
ACTN4O43707 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.04■□□□□ 0.48
ACTN4O43707 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms