Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.97■□□□□ 0.31
TNRC18O15417 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.97■□□□□ 0.31
TNRC18O15417 AC138028.4-201ENST00000564984 1845 ntBASIC16.97■□□□□ 0.31
TNRC18O15417 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNRC18O15417 SIGLEC20P-201ENST00000595243 1311 ntBASIC16.97■□□□□ 0.31
TNRC18O15417 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNRC18O15417 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TNRC18O15417 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNRC18O15417 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TNRC18O15417 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TNRC18O15417 MIR566-201ENST00000385187 94 ntBASIC16.97■□□□□ 0.31
TNRC18O15417 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.97■□□□□ 0.31
TNRC18O15417 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC16.97■□□□□ 0.31
TNRC18O15417 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.97■□□□□ 0.31
TNRC18O15417 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.97■□□□□ 0.31
TNRC18O15417 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC16.97■□□□□ 0.31
TNRC18O15417 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.97■□□□□ 0.31
TNRC18O15417 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.97■□□□□ 0.31
TNRC18O15417 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TNRC18O15417 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TNRC18O15417 BX323043.1-201ENST00000641006 1765 ntBASIC16.97■□□□□ 0.31
TNRC18O15417 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
TNRC18O15417 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
TNRC18O15417 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNRC18O15417 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNRC18O15417 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.96■□□□□ 0.31
TNRC18O15417 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TNRC18O15417 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TNRC18O15417 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.96■□□□□ 0.31
TNRC18O15417 AL645933.1-201ENST00000440087 609 ntBASIC16.96■□□□□ 0.31
TNRC18O15417 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.96■□□□□ 0.31
TNRC18O15417 TUBB8P7-204ENST00000567960 1332 ntBASIC16.96■□□□□ 0.31
TNRC18O15417 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.96■□□□□ 0.31
TNRC18O15417 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNRC18O15417 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TNRC18O15417 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNRC18O15417 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.96■□□□□ 0.31
TNRC18O15417 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TNRC18O15417 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TNRC18O15417 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TNRC18O15417 HMGB1P24-201ENST00000611897 328 ntBASIC16.96■□□□□ 0.31
TNRC18O15417 AC084781.1-201ENST00000613737 656 ntBASIC16.96■□□□□ 0.31
TNRC18O15417 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
TNRC18O15417 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.96■□□□□ 0.31
TNRC18O15417 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNRC18O15417 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TNRC18O15417 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TNRC18O15417 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TNRC18O15417 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.96■□□□□ 0.3
TNRC18O15417 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.95■□□□□ 0.3
TNRC18O15417 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 KIR2DL4-207ENST00000396293 715 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 GAPDHP40-201ENST00000505218 1006 ntBASIC16.95■□□□□ 0.3
TNRC18O15417 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC16.95■□□□□ 0.3
TNRC18O15417 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC16.95■□□□□ 0.3
TNRC18O15417 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC16.95■□□□□ 0.3
TNRC18O15417 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TNRC18O15417 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.95■□□□□ 0.3
TNRC18O15417 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TNRC18O15417 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.95■□□□□ 0.3
TNRC18O15417 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TNRC18O15417 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 HIST2H2BA-201ENST00000412169 381 ntBASIC16.95■□□□□ 0.3
TNRC18O15417 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.95■□□□□ 0.3
TNRC18O15417 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.95■□□□□ 0.3
TNRC18O15417 AC084752.1-201ENST00000509766 622 ntBASIC16.95■□□□□ 0.3
TNRC18O15417 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.95■□□□□ 0.3
TNRC18O15417 AC011462.4-201ENST00000616866 449 ntBASIC16.95■□□□□ 0.3
TNRC18O15417 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.95■□□□□ 0.3
TNRC18O15417 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.95■□□□□ 0.3
TNRC18O15417 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.95■□□□□ 0.3
TNRC18O15417 HLA-A-202ENST00000376806 1854 ntBASIC16.95■□□□□ 0.3
TNRC18O15417 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.95■□□□□ 0.3
TNRC18O15417 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNRC18O15417 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.95■□□□□ 0.3
TNRC18O15417 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNRC18O15417 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.94■□□□□ 0.3
TNRC18O15417 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNRC18O15417 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNRC18O15417 GCSHP3-201ENST00000431120 391 ntBASIC16.94■□□□□ 0.3
TNRC18O15417 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC16.94■□□□□ 0.3
TNRC18O15417 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC16.94■□□□□ 0.3
TNRC18O15417 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC16.94■□□□□ 0.3
TNRC18O15417 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms