Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.66□□□□□ -0.22
TSPAN4O14817 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.66□□□□□ -0.22
TSPAN4O14817 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 AL671710.1-201ENST00000610245 2349 ntBASIC13.66□□□□□ -0.22
TSPAN4O14817 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.66□□□□□ -0.22
TSPAN4O14817 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.66□□□□□ -0.22
TSPAN4O14817 PCED1CP-201ENST00000419887 785 ntBASIC13.66□□□□□ -0.22
TSPAN4O14817 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.66□□□□□ -0.22
TSPAN4O14817 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC13.66□□□□□ -0.22
TSPAN4O14817 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.66□□□□□ -0.22
TSPAN4O14817 LINC01451-201ENST00000623792 534 ntBASIC13.66□□□□□ -0.22
TSPAN4O14817 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.66□□□□□ -0.22
TSPAN4O14817 AP000550.4-202ENST00000639755 178 ntBASIC13.66□□□□□ -0.22
TSPAN4O14817 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TSPAN4O14817 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
TSPAN4O14817 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.66□□□□□ -0.22
TSPAN4O14817 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.66□□□□□ -0.22
TSPAN4O14817 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.66□□□□□ -0.22
TSPAN4O14817 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TSPAN4O14817 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.65□□□□□ -0.22
TSPAN4O14817 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 AC232323.1-201ENST00000540724 2099 ntBASIC13.65□□□□□ -0.22
TSPAN4O14817 REXO1L5P-201ENST00000622260 2098 ntBASIC13.65□□□□□ -0.22
TSPAN4O14817 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.65□□□□□ -0.22
TSPAN4O14817 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.65□□□□□ -0.22
TSPAN4O14817 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
TSPAN4O14817 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
TSPAN4O14817 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 AC026396.1-201ENST00000419388 421 ntBASIC13.65□□□□□ -0.22
TSPAN4O14817 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.65□□□□□ -0.22
TSPAN4O14817 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC13.65□□□□□ -0.22
TSPAN4O14817 AC005332.3-201ENST00000589904 676 ntBASIC13.65□□□□□ -0.22
TSPAN4O14817 AC011498.5-201ENST00000592027 486 ntBASIC13.65□□□□□ -0.22
TSPAN4O14817 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
TSPAN4O14817 AC116407.4-201ENST00000623319 1061 ntBASIC13.65□□□□□ -0.22
TSPAN4O14817 IER3-202ENST00000376377 1350 ntBASIC13.65□□□□□ -0.22
TSPAN4O14817 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TSPAN4O14817 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
TSPAN4O14817 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC13.65□□□□□ -0.22
TSPAN4O14817 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
TSPAN4O14817 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.65□□□□□ -0.22
TSPAN4O14817 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
TSPAN4O14817 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.64□□□□□ -0.23
TSPAN4O14817 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
TSPAN4O14817 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms