Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UPK1AO00322 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1AO00322 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1AO00322 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1AO00322 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.29■□□□□ 0.04
UPK1AO00322 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.29■□□□□ 0.04
UPK1AO00322 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.29■□□□□ 0.04
UPK1AO00322 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
UPK1AO00322 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
UPK1AO00322 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
UPK1AO00322 CICP24-201ENST00000605464 2705 ntBASIC15.29■□□□□ 0.04
UPK1AO00322 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1AO00322 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1AO00322 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1AO00322 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1AO00322 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1AO00322 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UPK1AO00322 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UPK1AO00322 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.29■□□□□ 0.04
UPK1AO00322 TMBIM7P-203ENST00000641617 1718 ntBASIC15.29■□□□□ 0.04
UPK1AO00322 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
UPK1AO00322 AP002414.2-201ENST00000591780 3365 ntBASIC15.28■□□□□ 0.04
UPK1AO00322 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.28■□□□□ 0.04
UPK1AO00322 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 AC008677.1-201ENST00000519230 1561 ntBASIC15.28■□□□□ 0.04
UPK1AO00322 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
UPK1AO00322 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
UPK1AO00322 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
UPK1AO00322 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.28■□□□□ 0.04
UPK1AO00322 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC15.28■□□□□ 0.04
UPK1AO00322 AL355306.1-201ENST00000415580 579 ntBASIC15.28■□□□□ 0.04
UPK1AO00322 AL671277.1-201ENST00000429656 993 ntBASIC15.28■□□□□ 0.04
UPK1AO00322 PRYP6-201ENST00000514804 343 ntBASIC15.28■□□□□ 0.04
UPK1AO00322 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.28■□□□□ 0.04
UPK1AO00322 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.28■□□□□ 0.04
UPK1AO00322 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.28■□□□□ 0.04
UPK1AO00322 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.28■□□□□ 0.04
UPK1AO00322 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
UPK1AO00322 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.28■□□□□ 0.04
UPK1AO00322 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
UPK1AO00322 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.28■□□□□ 0.04
UPK1AO00322 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
UPK1AO00322 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
UPK1AO00322 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.27■□□□□ 0.04
UPK1AO00322 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.27■□□□□ 0.04
UPK1AO00322 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.27■□□□□ 0.04
UPK1AO00322 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
UPK1AO00322 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
UPK1AO00322 AKAP8P1-201ENST00000434743 1349 ntBASIC15.27■□□□□ 0.04
UPK1AO00322 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.27■□□□□ 0.04
UPK1AO00322 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
UPK1AO00322 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
UPK1AO00322 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.27■□□□□ 0.04
UPK1AO00322 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.27■□□□□ 0.04
UPK1AO00322 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.27■□□□□ 0.04
UPK1AO00322 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.27■□□□□ 0.04
UPK1AO00322 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.27■□□□□ 0.04
UPK1AO00322 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
UPK1AO00322 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
UPK1AO00322 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.27■□□□□ 0.04
UPK1AO00322 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.27■□□□□ 0.04
UPK1AO00322 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.27■□□□□ 0.04
UPK1AO00322 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.27■□□□□ 0.04
UPK1AO00322 AL138918.1-201ENST00000568306 659 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms