Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX39AO00148 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.1■□□□□ 0.49
DDX39AO00148 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
DDX39AO00148 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX39AO00148 AL035633.1-201ENST00000406139 838 ntBASIC18.1■□□□□ 0.49
DDX39AO00148 SPDYE17-201ENST00000412399 783 ntBASIC18.1■□□□□ 0.49
DDX39AO00148 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 TERF1P3-201ENST00000505638 1227 ntBASIC18.1■□□□□ 0.49
DDX39AO00148 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX39AO00148 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.1■□□□□ 0.49
DDX39AO00148 AL033527.5-202ENST00000641632 1098 ntBASIC18.1■□□□□ 0.49
DDX39AO00148 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.1■□□□□ 0.49
DDX39AO00148 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.1■□□□□ 0.49
DDX39AO00148 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
DDX39AO00148 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX39AO00148 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
DDX39AO00148 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
DDX39AO00148 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DDX39AO00148 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX39AO00148 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DDX39AO00148 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.09■□□□□ 0.49
DDX39AO00148 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC18.09■□□□□ 0.49
DDX39AO00148 SERBP1P3-201ENST00000459980 809 ntBASIC18.09■□□□□ 0.49
DDX39AO00148 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC18.09■□□□□ 0.49
DDX39AO00148 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
DDX39AO00148 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.09■□□□□ 0.49
DDX39AO00148 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.09■□□□□ 0.49
DDX39AO00148 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.09■□□□□ 0.49
DDX39AO00148 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
DDX39AO00148 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
DDX39AO00148 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DDX39AO00148 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX39AO00148 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.09■□□□□ 0.49
DDX39AO00148 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX39AO00148 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DDX39AO00148 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DDX39AO00148 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.08■□□□□ 0.49
DDX39AO00148 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.08■□□□□ 0.49
DDX39AO00148 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.08■□□□□ 0.49
DDX39AO00148 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX39AO00148 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX39AO00148 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX39AO00148 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
DDX39AO00148 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
DDX39AO00148 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
DDX39AO00148 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX39AO00148 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX39AO00148 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
DDX39AO00148 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX39AO00148 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX39AO00148 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
DDX39AO00148 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX39AO00148 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.08■□□□□ 0.48
DDX39AO00148 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX39AO00148 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX39AO00148 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.08■□□□□ 0.48
DDX39AO00148 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.08■□□□□ 0.48
DDX39AO00148 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.08■□□□□ 0.48
DDX39AO00148 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.08■□□□□ 0.48
DDX39AO00148 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX39AO00148 AC135586.1-201ENST00000539323 574 ntBASIC18.08■□□□□ 0.48
DDX39AO00148 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
DDX39AO00148 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
DDX39AO00148 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.08■□□□□ 0.48
DDX39AO00148 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC18.08■□□□□ 0.48
DDX39AO00148 AL109936.8-201ENST00000641772 604 ntBASIC18.08■□□□□ 0.48
DDX39AO00148 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX39AO00148 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
DDX39AO00148 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
DDX39AO00148 BNIP3P1-202ENST00000550043 1585 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms