Protein–RNA interactions for Protein: A6NKF1

SAC3D1, SAC3 domain-containing protein 1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAC3D1A6NKF1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 AK4P3-201ENST00000418260 669 ntBASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 PAWRP1-201ENST00000451083 565 ntBASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 LINC01238-205ENST00000567549 1107 ntBASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 AC092127.1-201ENST00000567093 3455 ntBASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SAC3D1A6NKF1 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 AC105250.1-201ENST00000509378 2057 ntBASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 AC112693.3-201ENST00000624819 1983 ntBASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 AC087163.2-201ENST00000457299 853 ntBASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 NTF6B-201ENST00000591913 560 ntBASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 AC064862.7-201ENST00000604520 867 ntBASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 C18orf15-201ENST00000623680 2534 ntBASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 GRK6P1-201ENST00000400595 1711 ntBASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.17■□□□□ 0.02
SAC3D1A6NKF1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms