Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.5■■□□□ 1.03
SBNO1A3KN83 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC21.5■■□□□ 1.03
SBNO1A3KN83 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC21.5■■□□□ 1.03
SBNO1A3KN83 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SBNO1A3KN83 AC009053.2-201ENST00000563701 2365 ntBASIC21.5■■□□□ 1.03
SBNO1A3KN83 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
SBNO1A3KN83 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 PHKG1P2-201ENST00000457537 863 ntBASIC21.49■■□□□ 1.03
SBNO1A3KN83 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC21.49■■□□□ 1.03
SBNO1A3KN83 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC21.49■■□□□ 1.03
SBNO1A3KN83 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC21.49■■□□□ 1.03
SBNO1A3KN83 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC21.49■■□□□ 1.03
SBNO1A3KN83 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC21.49■■□□□ 1.03
SBNO1A3KN83 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
SBNO1A3KN83 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC21.49■■□□□ 1.03
SBNO1A3KN83 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC21.49■■□□□ 1.03
SBNO1A3KN83 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
SBNO1A3KN83 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC21.49■■□□□ 1.03
SBNO1A3KN83 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
SBNO1A3KN83 FAM197Y7-201ENST00000432892 766 ntBASIC21.48■■□□□ 1.03
SBNO1A3KN83 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 AC078819.1-201ENST00000547454 765 ntBASIC21.48■■□□□ 1.03
SBNO1A3KN83 AC012085.1-201ENST00000548270 765 ntBASIC21.48■■□□□ 1.03
SBNO1A3KN83 FOS-206ENST00000555347 1280 ntTSL 2 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 HARS-202ENST00000415192 1401 ntTSL 2 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SBNO1A3KN83 AC004898.1-201ENST00000451057 766 ntBASIC21.48■■□□□ 1.03
SBNO1A3KN83 SCARNA20.5-201ENST00000516991 142 ntBASIC21.48■■□□□ 1.03
SBNO1A3KN83 ACTG1P17-201ENST00000558391 1119 ntBASIC21.48■■□□□ 1.03
SBNO1A3KN83 AP006547.1-201ENST00000563435 692 ntBASIC21.48■■□□□ 1.03
SBNO1A3KN83 KSR1-207ENST00000578981 748 ntTSL 4 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 AC015910.1-201ENST00000579400 975 ntBASIC21.48■■□□□ 1.03
SBNO1A3KN83 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC21.48■■□□□ 1.03
SBNO1A3KN83 AC097359.3-201ENST00000603982 1210 ntBASIC21.48■■□□□ 1.03
SBNO1A3KN83 AC107373.2-201ENST00000607735 490 ntBASIC21.48■■□□□ 1.03
SBNO1A3KN83 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 AC138028.6-201ENST00000616106 1482 ntBASIC21.47■■□□□ 1.03
SBNO1A3KN83 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SBNO1A3KN83 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC21.47■■□□□ 1.03
SBNO1A3KN83 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms