Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 DUX4L26-201ENST00000489078 1255 ntBASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 AC012615.1-201ENST00000565797 1299 ntBASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 AC134407.2-201ENST00000625089 1978 ntBASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TCRBV3S1A0A5B6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 RNU1-129P-201ENST00000384064 167 ntBASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 AL031133.1-201ENST00000406807 723 ntBASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 RBM17P3-201ENST00000417687 1192 ntBASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 MIR3180-1-201ENST00000580374 94 ntBASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 U1.21-201ENST00000580816 167 ntBASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 MIR3180-3-201ENST00000584616 94 ntBASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TCRBV3S1A0A5B6 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
TCRBV3S1A0A5B6 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TCRBV3S1A0A5B6 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms