Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC113367.3-201ENST00000508316 1912 ntBASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 AC021752.1-202ENST00000613161 2398 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 FUT8-AS1-201ENST00000621019 1521 ntBASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC8.28□□□□□ -1.08
LINC01558Q9Y6Z2 PCDHA5-203ENST00000614258 4248 ntBASIC8.27□□□□□ -1.08
LINC01558Q9Y6Z2 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC8.27□□□□□ -1.08
LINC01558Q9Y6Z2 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC8.27□□□□□ -1.08
LINC01558Q9Y6Z2 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
LINC01558Q9Y6Z2 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
LINC01558Q9Y6Z2 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.08
LINC01558Q9Y6Z2 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC8.27□□□□□ -1.08
LINC01558Q9Y6Z2 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
LINC01558Q9Y6Z2 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC8.27□□□□□ -1.08
LINC01558Q9Y6Z2 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 RER1-204ENST00000378518 522 ntTSL 3 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 TMEM198B-204ENST00000484016 896 ntBASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 RARRES2P4-201ENST00000514074 484 ntBASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 AL356740.2-201ENST00000601559 647 ntBASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
LINC01558Q9Y6Z2 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms