Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00588Q9Y4M8 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC00588Q9Y4M8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
LINC00588Q9Y4M8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 AC007541.1-201ENST00000570282 1469 ntBASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 GNAQP1-201ENST00000444815 1067 ntBASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 AC027307.3-201ENST00000594262 1100 ntBASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 AL132655.2-201ENST00000596276 594 ntBASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 PCDHA14-201ENST00000506751 2298 ntBASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 AC006449.6-201ENST00000612330 2296 ntBASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
LINC00588Q9Y4M8 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 SPDYE19P-201ENST00000338590 713 ntBASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 AC114501.2-201ENST00000439631 535 ntBASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 DOC2GP-202ENST00000514950 1163 ntBASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 AL662799.1-202ENST00000614205 422 ntBASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 AC004461.2-201ENST00000629517 803 ntBASIC11.01□□□□□ -0.65
LINC00588Q9Y4M8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms