Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 SSH2-210ENST00000582084 560 ntTSL 3 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 AC004840.1-201ENST00000636359 365 ntBASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 AC022188.1-201ENST00000620960 1664 ntBASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
HDAC6Q9UBN7 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 AL645728.1-201ENST00000366221 2101 ntBASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 AL391256.1-201ENST00000443260 1855 ntBASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 COX5BP8-201ENST00000416911 349 ntBASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
HDAC6Q9UBN7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 AC105917.1-201ENST00000506637 2539 ntBASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
HDAC6Q9UBN7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.21■□□□□ 0.51
HDAC6Q9UBN7 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms