Protein–RNA interactions for Protein: Q9P2J3

KLHL9, Kelch-like protein 9, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL9Q9P2J3 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 POU5F1P6-201ENST00000466990 990 ntBASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 AC079140.1-201ENST00000508039 487 ntBASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 KRT8P48-201ENST00000515599 1220 ntBASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 KRT8P23-201ENST00000560090 1207 ntBASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 AL596442.2-201ENST00000610240 980 ntBASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 AC008267.7-201ENST00000624570 1194 ntBASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
KLHL9Q9P2J3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 AC092384.3-202ENST00000564646 2873 ntBASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 AC004461.1-201ENST00000412461 403 ntBASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 AL592309.1-201ENST00000443127 649 ntBASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 AC243562.1-201ENST00000560672 389 ntBASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 AP001160.2-201ENST00000596071 487 ntBASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 PCGF3-213ENST00000620529 1899 ntBASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
KLHL9Q9P2J3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
KLHL9Q9P2J3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
KLHL9Q9P2J3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KLHL9Q9P2J3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
KLHL9Q9P2J3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
KLHL9Q9P2J3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
KLHL9Q9P2J3 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
KLHL9Q9P2J3 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms