Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH4Q9P003 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH4Q9P003 CBR1-202ENST00000399191 838 ntTSL 3 BASIC15.14■□□□□ 0.01
CNIH4Q9P003 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CNIH4Q9P003 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.14■□□□□ 0.01
CNIH4Q9P003 AC004449.1-201ENST00000564240 433 ntBASIC15.14■□□□□ 0.01
CNIH4Q9P003 AC073389.1-201ENST00000595595 795 ntBASIC15.14■□□□□ 0.01
CNIH4Q9P003 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.14■□□□□ 0.01
CNIH4Q9P003 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.14■□□□□ 0.01
CNIH4Q9P003 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.14■□□□□ 0.01
CNIH4Q9P003 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.14■□□□□ 0.01
CNIH4Q9P003 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.14■□□□□ 0.01
CNIH4Q9P003 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CNIH4Q9P003 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH4Q9P003 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CNIH4Q9P003 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH4Q9P003 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH4Q9P003 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CNIH4Q9P003 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
CNIH4Q9P003 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 PRYP6-201ENST00000514804 343 ntBASIC15.13■□□□□ 0.01
CNIH4Q9P003 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 AP000842.3-202ENST00000569238 1080 ntBASIC15.13■□□□□ 0.01
CNIH4Q9P003 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 SSH2-211ENST00000590153 570 ntTSL 4 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 NFIC-211ENST00000641145 8399 ntBASIC15.13■□□□□ 0.01
CNIH4Q9P003 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CNIH4Q9P003 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.13■□□□□ 0.01
CNIH4Q9P003 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.12■□□□□ 0.01
CNIH4Q9P003 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CNIH4Q9P003 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms