Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 IMPDH1P4-201ENST00000445028 1534 ntBASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ECHDC1Q9NTX5 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 AL080243.2-201ENST00000418783 582 ntBASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 SPDYE12P-201ENST00000618416 771 ntBASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 AC008741.2-201ENST00000612792 3115 ntBASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 AP005117.1-202ENST00000581724 1908 ntBASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ECHDC1Q9NTX5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 AC018892.3-201ENST00000623986 2499 ntBASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 RPL37AP1-201ENST00000412502 279 ntBASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 PMS2P2-201ENST00000425039 1128 ntBASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 HLA-V-204ENST00000476601 1289 ntBASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ECHDC1Q9NTX5 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 HIST3H2BA-201ENST00000436555 524 ntBASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 AC069120.2-201ENST00000524091 540 ntBASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 DUX4L27-201ENST00000554796 1261 ntBASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
ECHDC1Q9NTX5 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ECHDC1Q9NTX5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms