Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.22■□□□□ 0.67
RTN4Q9NQC3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 AC006538.1-201ENST00000567905 1585 ntBASIC19.22■□□□□ 0.67
RTN4Q9NQC3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 SRC-202ENST00000373558 4304 ntTSL 5 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 AC087386.2-201ENST00000623212 4637 ntBASIC19.22■□□□□ 0.67
RTN4Q9NQC3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 YY2-201ENST00000429584 2741 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4Q9NQC3 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 AC232323.1-201ENST00000540724 2099 ntBASIC19.21■□□□□ 0.67
RTN4Q9NQC3 REXO1L5P-201ENST00000622260 2098 ntBASIC19.21■□□□□ 0.67
RTN4Q9NQC3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.21■□□□□ 0.67
RTN4Q9NQC3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 AL596275.1-201ENST00000423464 877 ntBASIC19.21■□□□□ 0.67
RTN4Q9NQC3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 AC002558.1-201ENST00000488906 803 ntBASIC19.21■□□□□ 0.67
RTN4Q9NQC3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 AP003733.1-201ENST00000491725 852 ntBASIC19.21■□□□□ 0.67
RTN4Q9NQC3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4Q9NQC3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 TPM3-207ENST00000341372 2007 ntTSL 5 BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 AC097374.2-201ENST00000618617 1306 ntBASIC19.2■□□□□ 0.66
RTN4Q9NQC3 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4Q9NQC3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 COX5BP2-201ENST00000392354 334 ntBASIC19.19■□□□□ 0.66
RTN4Q9NQC3 FAM8A6P-201ENST00000407496 1135 ntBASIC19.19■□□□□ 0.66
RTN4Q9NQC3 AC087499.1-201ENST00000418141 1075 ntBASIC19.19■□□□□ 0.66
RTN4Q9NQC3 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4Q9NQC3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms