Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.27■□□□□ 0.04
NEUROD4Q9HD90 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
NEUROD4Q9HD90 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 AC073389.1-201ENST00000595595 795 ntBASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 AC134684.3-201ENST00000641758 218 ntBASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NEUROD4Q9HD90 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 AKAP8P1-201ENST00000434743 1349 ntBASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 AC004832.2-201ENST00000426397 482 ntBASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 AC105233.2-201ENST00000523697 349 ntBASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 AF228730.5-201ENST00000530288 346 ntBASIC15.25■□□□□ 0.03
NEUROD4Q9HD90 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms