Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 AC004449.1-201ENST00000564240 433 ntBASIC14.99□□□□□ -0.01
UBQLN3Q9H347 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
UBQLN3Q9H347 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 RBPMS2P1-201ENST00000437762 623 ntBASIC14.98□□□□□ -0.01
UBQLN3Q9H347 SPDYE14P-201ENST00000442619 822 ntBASIC14.98□□□□□ -0.01
UBQLN3Q9H347 CYMP-203ENST00000474680 1263 ntBASIC14.98□□□□□ -0.01
UBQLN3Q9H347 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 PRYP6-201ENST00000514804 343 ntBASIC14.98□□□□□ -0.01
UBQLN3Q9H347 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.98□□□□□ -0.01
UBQLN3Q9H347 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
UBQLN3Q9H347 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 FOXO1B-201ENST00000504678 1527 ntBASIC14.97□□□□□ -0.01
UBQLN3Q9H347 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 AC026150.2-201ENST00000564693 1156 ntBASIC14.97□□□□□ -0.01
UBQLN3Q9H347 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
UBQLN3Q9H347 AC020765.3-201ENST00000613051 740 ntBASIC14.97□□□□□ -0.01
UBQLN3Q9H347 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms