Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 AC023274.1-201ENST00000418278 595 ntBASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 AL161645.1-201ENST00000622716 1255 ntBASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UPF3BQ9BZI7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC19.27■□□□□ 0.67
UPF3BQ9BZI7 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
UPF3BQ9BZI7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
UPF3BQ9BZI7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UPF3BQ9BZI7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
UPF3BQ9BZI7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
UPF3BQ9BZI7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
UPF3BQ9BZI7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UPF3BQ9BZI7 AC126177.1-201ENST00000547829 2218 ntBASIC19.27■□□□□ 0.67
UPF3BQ9BZI7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 AC134407.2-201ENST00000625089 1978 ntBASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 FOXO1B-201ENST00000504678 1527 ntBASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 AC002056.1-201ENST00000395613 760 ntBASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
UPF3BQ9BZI7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 AC104640.1-201ENST00000562617 2109 ntBASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 AL591424.1-201ENST00000442569 1213 ntBASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 FAM197Y3-203ENST00000618346 717 ntBASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 AC091812.2-201ENST00000619081 385 ntBASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC19.25■□□□□ 0.67
UPF3BQ9BZI7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms