Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 AC005593.1-201ENST00000624894 515 ntBASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.5■□□□□ 0.07
THUMPD3Q9BV44 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 AC097376.2-205ENST00000610159 5334 ntBASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 AC016027.1-202ENST00000607927 1699 ntBASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 AC092910.1-201ENST00000482027 1129 ntBASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 AL049840.3-201ENST00000602669 611 ntBASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 PPT1-215ENST00000641471 2368 ntBASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
THUMPD3Q9BV44 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 AC009078.2-202ENST00000463353 338 ntBASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 AC008667.4-201ENST00000607370 168 ntBASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.48■□□□□ 0.07
THUMPD3Q9BV44 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms