Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 MIR346-201ENST00000362234 95 ntBASIC14.53□□□□□ -0.08
USB1Q9BQ65 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 FAM86GP-201ENST00000448322 971 ntBASIC14.53□□□□□ -0.08
USB1Q9BQ65 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
USB1Q9BQ65 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
USB1Q9BQ65 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
USB1Q9BQ65 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
USB1Q9BQ65 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
USB1Q9BQ65 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
USB1Q9BQ65 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
USB1Q9BQ65 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
USB1Q9BQ65 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
USB1Q9BQ65 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
USB1Q9BQ65 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
USB1Q9BQ65 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
USB1Q9BQ65 UXT-AS1-201ENST00000590504 1525 ntBASIC14.52□□□□□ -0.08
USB1Q9BQ65 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
USB1Q9BQ65 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
USB1Q9BQ65 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.52□□□□□ -0.08
USB1Q9BQ65 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
USB1Q9BQ65 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
USB1Q9BQ65 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
USB1Q9BQ65 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
USB1Q9BQ65 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 EIF2S2P5-201ENST00000457635 968 ntBASIC14.52□□□□□ -0.09
USB1Q9BQ65 CYMP-203ENST00000474680 1263 ntBASIC14.52□□□□□ -0.09
USB1Q9BQ65 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 AC114550.1-202ENST00000522661 643 ntTSL 2 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
USB1Q9BQ65 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 AC027307.2-201ENST00000591252 911 ntBASIC14.52□□□□□ -0.09
USB1Q9BQ65 AC073389.1-201ENST00000595595 795 ntBASIC14.52□□□□□ -0.09
USB1Q9BQ65 AC020765.3-201ENST00000613051 740 ntBASIC14.52□□□□□ -0.09
USB1Q9BQ65 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
USB1Q9BQ65 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
USB1Q9BQ65 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
USB1Q9BQ65 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 DBET-201ENST00000630918 3363 ntBASIC14.52□□□□□ -0.09
USB1Q9BQ65 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
USB1Q9BQ65 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
USB1Q9BQ65 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms