Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 AC104794.3-201ENST00000566840 1248 ntBASIC13.13□□□□□ -0.31
ZNF48Q96MX3 TP53TG3HP-202ENST00000569755 579 ntBASIC13.13□□□□□ -0.31
ZNF48Q96MX3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 AC061975.2-201ENST00000581722 295 ntBASIC13.13□□□□□ -0.31
ZNF48Q96MX3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 AL589702.1-201ENST00000641229 1509 ntBASIC13.13□□□□□ -0.31
ZNF48Q96MX3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.13□□□□□ -0.31
ZNF48Q96MX3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 AL031731.1-201ENST00000642131 2094 ntBASIC13.12□□□□□ -0.31
ZNF48Q96MX3 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 GPAA1P2-202ENST00000606848 1787 ntBASIC13.12□□□□□ -0.31
ZNF48Q96MX3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 RN7SL618P-201ENST00000477850 296 ntBASIC13.12□□□□□ -0.31
ZNF48Q96MX3 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 AC010336.2-201ENST00000564226 506 ntBASIC13.12□□□□□ -0.31
ZNF48Q96MX3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.12□□□□□ -0.31
ZNF48Q96MX3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms