Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SNX27Q96L92 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SNX27Q96L92 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNX27Q96L92 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.33■□□□□ 0.37
SNX27Q96L92 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.33■□□□□ 0.37
SNX27Q96L92 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNX27Q96L92 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNX27Q96L92 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SNX27Q96L92 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNX27Q96L92 AC134407.2-201ENST00000625089 1978 ntBASIC17.33■□□□□ 0.37
SNX27Q96L92 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.37
SNX27Q96L92 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNX27Q96L92 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
SNX27Q96L92 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNX27Q96L92 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SNX27Q96L92 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SNX27Q96L92 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SNX27Q96L92 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.33■□□□□ 0.37
SNX27Q96L92 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SNX27Q96L92 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.33■□□□□ 0.36
SNX27Q96L92 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX27Q96L92 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX27Q96L92 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SNX27Q96L92 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.33■□□□□ 0.36
SNX27Q96L92 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.33■□□□□ 0.36
SNX27Q96L92 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SNX27Q96L92 MIR648-201ENST00000385046 94 ntBASIC17.33■□□□□ 0.36
SNX27Q96L92 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.33■□□□□ 0.36
SNX27Q96L92 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.33■□□□□ 0.36
SNX27Q96L92 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SNX27Q96L92 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.33■□□□□ 0.36
SNX27Q96L92 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.33■□□□□ 0.36
SNX27Q96L92 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX27Q96L92 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.33■□□□□ 0.36
SNX27Q96L92 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SNX27Q96L92 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNX27Q96L92 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SNX27Q96L92 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.33■□□□□ 0.36
SNX27Q96L92 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.33■□□□□ 0.36
SNX27Q96L92 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNX27Q96L92 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SNX27Q96L92 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SNX27Q96L92 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.32■□□□□ 0.36
SNX27Q96L92 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX27Q96L92 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.32■□□□□ 0.36
SNX27Q96L92 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX27Q96L92 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SNX27Q96L92 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SNX27Q96L92 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX27Q96L92 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.32■□□□□ 0.36
SNX27Q96L92 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC17.32■□□□□ 0.36
SNX27Q96L92 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.32■□□□□ 0.36
SNX27Q96L92 AC004233.3-201ENST00000607794 1269 ntBASIC17.32■□□□□ 0.36
SNX27Q96L92 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 AC004461.2-201ENST00000629517 803 ntBASIC17.32■□□□□ 0.36
SNX27Q96L92 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
SNX27Q96L92 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SNX27Q96L92 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNX27Q96L92 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNX27Q96L92 AL596087.1-201ENST00000400979 1969 ntBASIC17.31■□□□□ 0.36
SNX27Q96L92 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX27Q96L92 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX27Q96L92 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.31■□□□□ 0.36
SNX27Q96L92 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
SNX27Q96L92 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SNX27Q96L92 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SNX27Q96L92 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
SNX27Q96L92 AC084018.2-201ENST00000613093 2607 ntBASIC17.31■□□□□ 0.36
SNX27Q96L92 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX27Q96L92 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNX27Q96L92 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms