Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 AC022145.2-201ENST00000598203 171 ntBASIC15.53■□□□□ 0.08
UBE2E3Q969T4 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBE2E3Q969T4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 AC010491.1-201ENST00000563101 2797 ntBASIC15.52■□□□□ 0.08
UBE2E3Q969T4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 AC069335.1-201ENST00000489972 472 ntBASIC15.52■□□□□ 0.08
UBE2E3Q969T4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBE2E3Q969T4 AL513210.1-201ENST00000629608 234 ntBASIC15.52■□□□□ 0.08
UBE2E3Q969T4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBE2E3Q969T4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
UBE2E3Q969T4 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.52■□□□□ 0.07
UBE2E3Q969T4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.52■□□□□ 0.07
UBE2E3Q969T4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBE2E3Q969T4 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBE2E3Q969T4 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.52■□□□□ 0.07
UBE2E3Q969T4 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBE2E3Q969T4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 LINC02199-201ENST00000506655 2702 ntBASIC15.51■□□□□ 0.07
UBE2E3Q969T4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 UPF3AP3-201ENST00000420996 769 ntBASIC15.51■□□□□ 0.07
UBE2E3Q969T4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 AP000344.2-201ENST00000512987 629 ntBASIC15.51■□□□□ 0.07
UBE2E3Q969T4 SLC25A39P2-201ENST00000537614 270 ntBASIC15.51■□□□□ 0.07
UBE2E3Q969T4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
UBE2E3Q969T4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms