Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
SMIM4Q8WVI0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SMIM4Q8WVI0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SMIM4Q8WVI0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.83□□□□□ -0.19
SMIM4Q8WVI0 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.83□□□□□ -0.19
SMIM4Q8WVI0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SMIM4Q8WVI0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
SMIM4Q8WVI0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SMIM4Q8WVI0 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 HCG4-201ENST00000418983 998 ntBASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 PRYP5-201ENST00000451909 266 ntBASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 AL139424.1-201ENST00000607572 797 ntBASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 AC114341.1-201ENST00000618070 349 ntBASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SMIM4Q8WVI0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 AJ011931.1-201ENST00000618749 2492 ntBASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 AC245100.5-201ENST00000452108 331 ntBASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 MINOS1P3-201ENST00000457048 203 ntBASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 AC092647.4-201ENST00000457211 535 ntBASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
SMIM4Q8WVI0 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM4Q8WVI0 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM4Q8WVI0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
SMIM4Q8WVI0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
SMIM4Q8WVI0 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SMIM4Q8WVI0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms