Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 MIR1247-201ENST00000408206 136 ntBASIC12.62□□□□□ -0.39
C3orf56Q8N813 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 GPAA1P2-201ENST00000417923 928 ntBASIC12.62□□□□□ -0.39
C3orf56Q8N813 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 AL355864.2-201ENST00000447420 863 ntBASIC12.62□□□□□ -0.39
C3orf56Q8N813 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 PC-204ENST00000524491 1714 ntTSL 2 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
C3orf56Q8N813 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
C3orf56Q8N813 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 AC133963.1-201ENST00000504166 1679 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 AC006538.1-201ENST00000567905 1585 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 AC005229.1-201ENST00000392885 409 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 SLC25A24P2-201ENST00000415059 510 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 ACTG1P3-201ENST00000431775 1114 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 RPL7P3-201ENST00000441388 714 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 PTP4A1P2-201ENST00000546033 454 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 AC079316.1-201ENST00000548397 411 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 RHOQP1-201ENST00000555758 579 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 AL365330.1-201ENST00000607459 531 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 AC091271.1-201ENST00000611877 1162 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 AL355312.1-201ENST00000407115 2176 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 FRMD8P1-201ENST00000440433 1524 ntBASIC12.61□□□□□ -0.39
C3orf56Q8N813 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
C3orf56Q8N813 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
C3orf56Q8N813 AC016396.2-201ENST00000562575 1417 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms