Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.64■□□□□ 0.25
PAF1Q8N7H5 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 AGGF1P2-201ENST00000426656 2106 ntBASIC16.63■□□□□ 0.25
PAF1Q8N7H5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 SPCS2P4-201ENST00000436160 681 ntBASIC16.63■□□□□ 0.25
PAF1Q8N7H5 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PAF1Q8N7H5 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 GGT3P-204ENST00000453783 1664 ntBASIC16.62■□□□□ 0.25
PAF1Q8N7H5 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 LINC01144-201ENST00000626198 1710 ntBASIC16.62■□□□□ 0.25
PAF1Q8N7H5 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 AC023141.5-201ENST00000458585 616 ntBASIC16.62■□□□□ 0.25
PAF1Q8N7H5 AC105233.2-201ENST00000523697 349 ntBASIC16.62■□□□□ 0.25
PAF1Q8N7H5 AF228730.5-201ENST00000530288 346 ntBASIC16.62■□□□□ 0.25
PAF1Q8N7H5 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 KRT8P23-201ENST00000560090 1207 ntBASIC16.62■□□□□ 0.25
PAF1Q8N7H5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 AC005052.1-201ENST00000625181 2492 ntBASIC16.62■□□□□ 0.25
PAF1Q8N7H5 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PAF1Q8N7H5 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PAF1Q8N7H5 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms