Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 AC097493.3-201ENST00000509725 367 ntBASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 AC069120.2-201ENST00000524091 540 ntBASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 MIR4453-201ENST00000584019 89 ntBASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CCDC33Q8N5R6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 AL596087.1-201ENST00000400979 1969 ntBASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 AC005622.1-201ENST00000636801 1703 ntBASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.97■□□□□ 0.31
CCDC33Q8N5R6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 MIR346-201ENST00000362234 95 ntBASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 AC005034.1-201ENST00000426657 489 ntBASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 AC244107.1-201ENST00000442033 332 ntBASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 LINC02560-201ENST00000596379 459 ntBASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 AC021097.1-201ENST00000607902 574 ntBASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CCDC33Q8N5R6 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms