Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
TRIM42Q8IWZ5 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.18■□□□□ 0.18
TRIM42Q8IWZ5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 NUS1P2-201ENST00000417358 873 ntBASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 TPM4P1-201ENST00000436100 807 ntBASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 KRT16P4-201ENST00000453883 522 ntBASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 UNC93B7-201ENST00000509439 705 ntBASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRIM42Q8IWZ5 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM42Q8IWZ5 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms