Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
SCXQ7RTU7 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 AC107918.2-201ENST00000530817 355 ntBASIC10.77□□□□□ -0.69
SCXQ7RTU7 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 AC004449.1-201ENST00000564240 433 ntBASIC10.77□□□□□ -0.69
SCXQ7RTU7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.77□□□□□ -0.69
SCXQ7RTU7 AL645728.2-201ENST00000641974 660 ntBASIC10.77□□□□□ -0.69
SCXQ7RTU7 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
SCXQ7RTU7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
SCXQ7RTU7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 HNRNPRP1-201ENST00000453465 1695 ntBASIC10.76□□□□□ -0.69
SCXQ7RTU7 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
SCXQ7RTU7 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC10.76□□□□□ -0.69
SCXQ7RTU7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms