Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 RPS2P1-201ENST00000434010 821 ntBASIC14.65□□□□□ -0.06
SHFQ7M4L6 IGHV3-65-201ENST00000523210 341 ntBASIC14.65□□□□□ -0.06
SHFQ7M4L6 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.65□□□□□ -0.06
SHFQ7M4L6 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SHFQ7M4L6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHFQ7M4L6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHFQ7M4L6 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 RPS2P28-201ENST00000314255 741 ntBASIC14.64□□□□□ -0.07
SHFQ7M4L6 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHFQ7M4L6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 AC105339.3-201ENST00000560043 636 ntBASIC14.64□□□□□ -0.07
SHFQ7M4L6 IFNL4P1-201ENST00000607083 540 ntBASIC14.64□□□□□ -0.07
SHFQ7M4L6 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 AC008735.5-201ENST00000623544 497 ntBASIC14.64□□□□□ -0.07
SHFQ7M4L6 AC005593.1-201ENST00000624894 515 ntBASIC14.64□□□□□ -0.07
SHFQ7M4L6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 AC012569.1-201ENST00000591191 1524 ntBASIC14.64□□□□□ -0.07
SHFQ7M4L6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHFQ7M4L6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHFQ7M4L6 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 AC006058.4-201ENST00000624016 1670 ntBASIC14.64□□□□□ -0.07
SHFQ7M4L6 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SHFQ7M4L6 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.64□□□□□ -0.07
SHFQ7M4L6 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHFQ7M4L6 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SHFQ7M4L6 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SHFQ7M4L6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SHFQ7M4L6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms