Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
USP45Q70EL2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.16■□□□□ 0.18
USP45Q70EL2 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.16■□□□□ 0.18
USP45Q70EL2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
USP45Q70EL2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
USP45Q70EL2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
USP45Q70EL2 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
USP45Q70EL2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
USP45Q70EL2 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
USP45Q70EL2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 AC004987.2-201ENST00000395959 1148 ntBASIC16.16■□□□□ 0.18
USP45Q70EL2 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.16■□□□□ 0.18
USP45Q70EL2 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.16■□□□□ 0.18
USP45Q70EL2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.16■□□□□ 0.18
USP45Q70EL2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.16■□□□□ 0.18
USP45Q70EL2 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.16■□□□□ 0.18
USP45Q70EL2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 AL691432.1-201ENST00000596308 1422 ntBASIC16.16■□□□□ 0.18
USP45Q70EL2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.16■□□□□ 0.18
USP45Q70EL2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.16■□□□□ 0.18
USP45Q70EL2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 AL136982.4-201ENST00000437689 1740 ntBASIC16.16■□□□□ 0.18
USP45Q70EL2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
USP45Q70EL2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
USP45Q70EL2 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
USP45Q70EL2 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.15■□□□□ 0.18
USP45Q70EL2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.15■□□□□ 0.18
USP45Q70EL2 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
USP45Q70EL2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.15■□□□□ 0.18
USP45Q70EL2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.15■□□□□ 0.18
USP45Q70EL2 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.15■□□□□ 0.18
USP45Q70EL2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.15■□□□□ 0.18
USP45Q70EL2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
USP45Q70EL2 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.15■□□□□ 0.18
USP45Q70EL2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 AC027369.6-201ENST00000525520 931 ntBASIC16.15■□□□□ 0.18
USP45Q70EL2 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
USP45Q70EL2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.15■□□□□ 0.18
USP45Q70EL2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.15■□□□□ 0.18
USP45Q70EL2 AL079307.3-201ENST00000556114 283 ntBASIC16.15■□□□□ 0.18
USP45Q70EL2 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
USP45Q70EL2 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.15■□□□□ 0.18
USP45Q70EL2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.15■□□□□ 0.18
USP45Q70EL2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
USP45Q70EL2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.15■□□□□ 0.18
USP45Q70EL2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
USP45Q70EL2 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
USP45Q70EL2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
USP45Q70EL2 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
USP45Q70EL2 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.14■□□□□ 0.18
USP45Q70EL2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
USP45Q70EL2 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.14■□□□□ 0.17
USP45Q70EL2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP45Q70EL2 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP45Q70EL2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
USP45Q70EL2 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP45Q70EL2 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP45Q70EL2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.14■□□□□ 0.17
USP45Q70EL2 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.14■□□□□ 0.17
USP45Q70EL2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP45Q70EL2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
USP45Q70EL2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP45Q70EL2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP45Q70EL2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP45Q70EL2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.14■□□□□ 0.17
USP45Q70EL2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
USP45Q70EL2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
USP45Q70EL2 CENPM-205ENST00000404067 905 ntTSL 3 BASIC16.14■□□□□ 0.17
USP45Q70EL2 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.14■□□□□ 0.17
USP45Q70EL2 AC055876.3-201ENST00000431496 288 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms