Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
FOXR1Q6PIV2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXR1Q6PIV2 AC010460.3-201ENST00000511359 1579 ntBASIC16.89■□□□□ 0.3
FOXR1Q6PIV2 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
FOXR1Q6PIV2 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 AC136632.2-201ENST00000512891 861 ntBASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 SNHG9-202ENST00000564014 471 ntBASIC16.89■□□□□ 0.29
FOXR1Q6PIV2 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms