Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 AC005622.1-201ENST00000636801 1703 ntBASIC14.73□□□□□ -0.05
NIPAL3Q6P499 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 AC004832.2-201ENST00000426397 482 ntBASIC14.73□□□□□ -0.05
NIPAL3Q6P499 FAM58CP-201ENST00000435741 640 ntBASIC14.73□□□□□ -0.05
NIPAL3Q6P499 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 MTDHP5-201ENST00000598980 586 ntBASIC14.73□□□□□ -0.05
NIPAL3Q6P499 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 AC091812.2-201ENST00000619081 385 ntBASIC14.73□□□□□ -0.05
NIPAL3Q6P499 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 MST1L-201ENST00000442552 2185 ntBASIC14.73□□□□□ -0.05
NIPAL3Q6P499 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NIPAL3Q6P499 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 AC023824.1-201ENST00000562945 2975 ntBASIC14.72□□□□□ -0.05
NIPAL3Q6P499 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 AC063926.3-201ENST00000624734 5658 ntBASIC14.72□□□□□ -0.05
NIPAL3Q6P499 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 MCCD1P2-201ENST00000423228 335 ntBASIC14.72□□□□□ -0.05
NIPAL3Q6P499 AC092474.2-201ENST00000424288 719 ntBASIC14.72□□□□□ -0.05
NIPAL3Q6P499 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 AL078644.1-201ENST00000609881 752 ntBASIC14.72□□□□□ -0.05
NIPAL3Q6P499 AL161645.1-201ENST00000622716 1255 ntBASIC14.72□□□□□ -0.05
NIPAL3Q6P499 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NIPAL3Q6P499 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 YBX2P1-201ENST00000394192 760 ntBASIC14.71□□□□□ -0.05
NIPAL3Q6P499 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 PPT1-215ENST00000641471 2368 ntBASIC14.71□□□□□ -0.05
NIPAL3Q6P499 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NIPAL3Q6P499 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms