Protein–RNA interactions for Protein: Q5SQS7

SH2D4B, SH2 domain-containing protein 4B, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4BQ5SQS7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 SCARNA2-201ENST00000458748 420 ntBASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 AC005412.3-201ENST00000580309 715 ntBASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 AC020765.3-201ENST00000613051 740 ntBASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SH2D4BQ5SQS7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 AC069224.1-201ENST00000566372 1715 ntBASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 HCG4-201ENST00000418983 998 ntBASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 AC006557.2-201ENST00000592985 1240 ntBASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 AC025062.2-201ENST00000605477 670 ntBASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SH2D4BQ5SQS7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SH2D4BQ5SQS7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.08■□□□□ 0.17
SH2D4BQ5SQS7 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SH2D4BQ5SQS7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SH2D4BQ5SQS7 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SH2D4BQ5SQS7 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SH2D4BQ5SQS7 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SH2D4BQ5SQS7 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.17
SH2D4BQ5SQS7 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.08■□□□□ 0.17
SH2D4BQ5SQS7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.08■□□□□ 0.16
SH2D4BQ5SQS7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms