Protein–RNA interactions for Protein: Q3SXM0

DCAF4L1, DDB1- and CUL4-associated factor 4-like protein 1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCAF4L1Q3SXM0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 DFFBP1-201ENST00000433250 979 ntBASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 AC093004.1-201ENST00000508850 424 ntBASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 AC092337.1-201ENST00000568699 1129 ntBASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 AC027307.3-201ENST00000594262 1100 ntBASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
DCAF4L1Q3SXM0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 SPDYE19P-201ENST00000338590 713 ntBASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 AC015922.1-201ENST00000421102 1152 ntBASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 SPDYE22P-201ENST00000582158 798 ntBASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 REXO1L1P-202ENST00000608646 1974 ntBASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.36■□□□□ 0.37
DCAF4L1Q3SXM0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 AC092364.2-201ENST00000596710 2692 ntBASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 AL353779.1-201ENST00000434793 351 ntBASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 GNAQP1-201ENST00000444815 1067 ntBASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 PHKG1P2-201ENST00000457537 863 ntBASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 TIMM17BP1-201ENST00000545713 516 ntBASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 AL450472.2-201ENST00000603663 1156 ntBASIC17.35■□□□□ 0.37
DCAF4L1Q3SXM0 AC004790.1-201ENST00000612686 536 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms