Protein–RNA interactions for Protein: Q15042

RAB3GAP1, Rab3 GTPase-activating protein catalytic subunit, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1Q15042 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 AL138918.1-201ENST00000568306 659 ntBASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 AC084121.4-201ENST00000641598 221 ntBASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 AF228730.8-201ENST00000642140 221 ntBASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RAB3GAP1Q15042 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 TNRC18P2-201ENST00000417666 2714 ntBASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 LINC02447-202ENST00000501888 2146 ntBASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 WARS-232ENST00000556645 2508 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB3GAP1Q15042 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 REXO1L8P-201ENST00000604378 1897 ntBASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 PPT1-215ENST00000641471 2368 ntBASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 AC107890.1-201ENST00000422478 521 ntBASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 AC055876.3-201ENST00000431496 288 ntBASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB3GAP1Q15042 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms