Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
ASIC1P78348 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.03■□□□□ 0.48
ASIC1P78348 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.03■□□□□ 0.48
ASIC1P78348 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.03■□□□□ 0.48
ASIC1P78348 GPX1P2-201ENST00000429271 606 ntBASIC18.03■□□□□ 0.48
ASIC1P78348 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.03■□□□□ 0.48
ASIC1P78348 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.03■□□□□ 0.48
ASIC1P78348 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.03■□□□□ 0.48
ASIC1P78348 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.03■□□□□ 0.48
ASIC1P78348 AP000842.3-202ENST00000569238 1080 ntBASIC18.03■□□□□ 0.48
ASIC1P78348 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.03■□□□□ 0.48
ASIC1P78348 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ASIC1P78348 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
ASIC1P78348 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.03■□□□□ 0.48
ASIC1P78348 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 CASK-202ENST00000378158 3848 ntTSL 5 BASIC18.03■□□□□ 0.48
ASIC1P78348 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
ASIC1P78348 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
ASIC1P78348 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.03■□□□□ 0.48
ASIC1P78348 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.02■□□□□ 0.48
ASIC1P78348 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.02■□□□□ 0.48
ASIC1P78348 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.02■□□□□ 0.48
ASIC1P78348 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.02■□□□□ 0.48
ASIC1P78348 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
ASIC1P78348 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
ASIC1P78348 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
ASIC1P78348 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
ASIC1P78348 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ASIC1P78348 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
ASIC1P78348 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.02■□□□□ 0.48
ASIC1P78348 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.02■□□□□ 0.48
ASIC1P78348 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.02■□□□□ 0.48
ASIC1P78348 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.02■□□□□ 0.48
ASIC1P78348 CEND1P1-201ENST00000451006 455 ntBASIC18.02■□□□□ 0.48
ASIC1P78348 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.02■□□□□ 0.48
ASIC1P78348 RNA5SP410-201ENST00000516285 106 ntBASIC18.02■□□□□ 0.48
ASIC1P78348 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
ASIC1P78348 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.02■□□□□ 0.48
ASIC1P78348 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.02■□□□□ 0.48
ASIC1P78348 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.02■□□□□ 0.48
ASIC1P78348 AL162727.3-201ENST00000635661 2787 ntBASIC18.02■□□□□ 0.48
ASIC1P78348 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
ASIC1P78348 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.02■□□□□ 0.47
ASIC1P78348 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ASIC1P78348 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
ASIC1P78348 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
ASIC1P78348 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
ASIC1P78348 ELL2P1-201ENST00000413990 1906 ntBASIC18.02■□□□□ 0.47
ASIC1P78348 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
ASIC1P78348 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.01■□□□□ 0.47
ASIC1P78348 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ASIC1P78348 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ASIC1P78348 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ASIC1P78348 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.01■□□□□ 0.47
ASIC1P78348 DNAJB3-201ENST00000446806 729 ntBASIC18.01■□□□□ 0.47
ASIC1P78348 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.01■□□□□ 0.47
ASIC1P78348 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
ASIC1P78348 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC18.01■□□□□ 0.47
ASIC1P78348 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC18.01■□□□□ 0.47
ASIC1P78348 LINC01225-203ENST00000563550 1244 ntBASIC18.01■□□□□ 0.47
ASIC1P78348 AC005829.1-201ENST00000570002 483 ntBASIC18.01■□□□□ 0.47
ASIC1P78348 AC061975.2-201ENST00000581722 295 ntBASIC18.01■□□□□ 0.47
ASIC1P78348 AC024267.1-201ENST00000582320 895 ntBASIC18.01■□□□□ 0.47
ASIC1P78348 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
ASIC1P78348 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.01■□□□□ 0.47
ASIC1P78348 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.01■□□□□ 0.47
ASIC1P78348 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
ASIC1P78348 UXT-AS1-201ENST00000590504 1525 ntBASIC18.01■□□□□ 0.47
ASIC1P78348 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ASIC1P78348 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
ASIC1P78348 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
ASIC1P78348 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ASIC1P78348 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
ASIC1P78348 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC18.01■□□□□ 0.47
ASIC1P78348 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ASIC1P78348 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.01■□□□□ 0.47
ASIC1P78348 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ASIC1P78348 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
ASIC1P78348 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms