Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TIMM8BP1-201ENST00000452384 211 ntBASIC14.11□□□□□ -0.15
HIST1H3AP68431 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 AC069335.1-201ENST00000489972 472 ntBASIC14.11□□□□□ -0.15
HIST1H3AP68431 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 IGHV3-62-201ENST00000520057 340 ntBASIC14.11□□□□□ -0.15
HIST1H3AP68431 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.11□□□□□ -0.15
HIST1H3AP68431 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 AC105339.1-204ENST00000636249 355 ntBASIC14.11□□□□□ -0.15
HIST1H3AP68431 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HIST1H3AP68431 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HIST1H3AP68431 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 AC068587.6-202ENST00000641839 5619 ntBASIC14.1□□□□□ -0.15
HIST1H3AP68431 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 RPS8P6-201ENST00000426177 609 ntBASIC14.1□□□□□ -0.15
HIST1H3AP68431 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 AL592309.1-201ENST00000443127 649 ntBASIC14.1□□□□□ -0.15
HIST1H3AP68431 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 AC243562.2-201ENST00000561247 970 ntBASIC14.1□□□□□ -0.15
HIST1H3AP68431 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.1□□□□□ -0.15
HIST1H3AP68431 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
HIST1H3AP68431 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 AC134407.2-201ENST00000625089 1978 ntBASIC14.09□□□□□ -0.15
HIST1H3AP68431 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HIST1H3AP68431 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 CEND1P1-201ENST00000451006 455 ntBASIC14.09□□□□□ -0.15
HIST1H3AP68431 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.09□□□□□ -0.15
HIST1H3AP68431 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms