Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC11.41□□□□□ -0.58
CKS1BP61024 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 KRT8P10-201ENST00000450021 1447 ntBASIC11.41□□□□□ -0.58
CKS1BP61024 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.41□□□□□ -0.58
CKS1BP61024 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CKS1BP61024 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CKS1BP61024 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
CKS1BP61024 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CKS1BP61024 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
CKS1BP61024 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CKS1BP61024 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CKS1BP61024 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.41□□□□□ -0.58
CKS1BP61024 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC11.4□□□□□ -0.58
CKS1BP61024 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CKS1BP61024 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 AC005562.1-201ENST00000583030 3219 ntBASIC11.4□□□□□ -0.58
CKS1BP61024 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 KLF4P1-201ENST00000412782 1185 ntBASIC11.4□□□□□ -0.58
CKS1BP61024 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC11.4□□□□□ -0.58
CKS1BP61024 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.4□□□□□ -0.58
CKS1BP61024 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.4□□□□□ -0.58
CKS1BP61024 AC090616.6-201ENST00000582640 721 ntBASIC11.4□□□□□ -0.58
CKS1BP61024 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 IGHV3-41-201ENST00000613121 348 ntBASIC11.4□□□□□ -0.58
CKS1BP61024 AC124864.1-201ENST00000623408 392 ntBASIC11.4□□□□□ -0.58
CKS1BP61024 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
CKS1BP61024 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
CKS1BP61024 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 AC125634.1-201ENST00000438758 1403 ntBASIC11.4□□□□□ -0.58
CKS1BP61024 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 AC009336.1-201ENST00000608941 1553 ntBASIC11.4□□□□□ -0.58
CKS1BP61024 AL049757.1-201ENST00000616842 1596 ntBASIC11.4□□□□□ -0.58
CKS1BP61024 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
CKS1BP61024 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
CKS1BP61024 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CKS1BP61024 AL021920.2-201ENST00000624828 1351 ntBASIC11.4□□□□□ -0.59
CKS1BP61024 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.59
CKS1BP61024 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
CKS1BP61024 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
CKS1BP61024 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
CKS1BP61024 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
CKS1BP61024 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
CKS1BP61024 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
CKS1BP61024 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
CKS1BP61024 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
CKS1BP61024 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.39□□□□□ -0.59
CKS1BP61024 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC11.39□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms