Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC18.14■□□□□ 0.49
EPHB4P54760 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.14■□□□□ 0.49
EPHB4P54760 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.14■□□□□ 0.49
EPHB4P54760 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.14■□□□□ 0.49
EPHB4P54760 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.14■□□□□ 0.49
EPHB4P54760 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.14■□□□□ 0.49
EPHB4P54760 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.14■□□□□ 0.49
EPHB4P54760 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.14■□□□□ 0.49
EPHB4P54760 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
EPHB4P54760 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
EPHB4P54760 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.14■□□□□ 0.49
EPHB4P54760 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
EPHB4P54760 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
EPHB4P54760 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
EPHB4P54760 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.14■□□□□ 0.49
EPHB4P54760 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EPHB4P54760 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
EPHB4P54760 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
EPHB4P54760 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHB4P54760 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 AC103702.1-201ENST00000548801 2630 ntBASIC18.13■□□□□ 0.49
EPHB4P54760 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.13■□□□□ 0.49
EPHB4P54760 AC131009.4-201ENST00000624048 1740 ntBASIC18.13■□□□□ 0.49
EPHB4P54760 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
EPHB4P54760 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHB4P54760 TTTY23B-201ENST00000442790 549 ntBASIC18.13■□□□□ 0.49
EPHB4P54760 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHB4P54760 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHB4P54760 SNX29P1-201ENST00000548357 1007 ntBASIC18.13■□□□□ 0.49
EPHB4P54760 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.13■□□□□ 0.49
EPHB4P54760 MPDU1-223ENST00000582151 728 ntBASIC18.13■□□□□ 0.49
EPHB4P54760 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
EPHB4P54760 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
EPHB4P54760 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHB4P54760 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
EPHB4P54760 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHB4P54760 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EPHB4P54760 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
EPHB4P54760 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.13■□□□□ 0.49
EPHB4P54760 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHB4P54760 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
EPHB4P54760 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.12■□□□□ 0.49
EPHB4P54760 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
EPHB4P54760 SLC25A1P3-201ENST00000395415 828 ntBASIC18.12■□□□□ 0.49
EPHB4P54760 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.12■□□□□ 0.49
EPHB4P54760 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.12■□□□□ 0.49
EPHB4P54760 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.12■□□□□ 0.49
EPHB4P54760 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.12■□□□□ 0.49
EPHB4P54760 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.12■□□□□ 0.49
EPHB4P54760 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHB4P54760 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHB4P54760 ZNF890P-202ENST00000530367 1156 ntBASIC18.12■□□□□ 0.49
EPHB4P54760 AL079307.3-201ENST00000556114 283 ntBASIC18.12■□□□□ 0.49
EPHB4P54760 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHB4P54760 AC105021.1-202ENST00000570572 669 ntBASIC18.12■□□□□ 0.49
EPHB4P54760 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.12■□□□□ 0.49
EPHB4P54760 MIR4538-201ENST00000581377 78 ntBASIC18.12■□□□□ 0.49
EPHB4P54760 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.12■□□□□ 0.49
EPHB4P54760 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
EPHB4P54760 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms