Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
BRCC3P46736 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
BRCC3P46736 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.08■□□□□ 0.32
BRCC3P46736 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.08■□□□□ 0.32
BRCC3P46736 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
BRCC3P46736 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
BRCC3P46736 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.08■□□□□ 0.32
BRCC3P46736 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.08■□□□□ 0.32
BRCC3P46736 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
BRCC3P46736 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
BRCC3P46736 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC17.07■□□□□ 0.32
BRCC3P46736 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.07■□□□□ 0.32
BRCC3P46736 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.07■□□□□ 0.32
BRCC3P46736 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.07■□□□□ 0.32
BRCC3P46736 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC17.07■□□□□ 0.32
BRCC3P46736 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.07■□□□□ 0.32
BRCC3P46736 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 CU639417.3-201ENST00000624240 1404 ntBASIC17.07■□□□□ 0.32
BRCC3P46736 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BRCC3P46736 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.07■□□□□ 0.32
BRCC3P46736 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC17.07■□□□□ 0.32
BRCC3P46736 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC17.07■□□□□ 0.32
BRCC3P46736 AC074338.1-201ENST00000416825 156 ntBASIC17.07■□□□□ 0.32
BRCC3P46736 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.07■□□□□ 0.32
BRCC3P46736 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
BRCC3P46736 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.07■□□□□ 0.32
BRCC3P46736 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.07■□□□□ 0.32
BRCC3P46736 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
BRCC3P46736 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.07■□□□□ 0.32
BRCC3P46736 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
BRCC3P46736 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.07■□□□□ 0.32
BRCC3P46736 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.07■□□□□ 0.32
BRCC3P46736 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.07■□□□□ 0.32
BRCC3P46736 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
BRCC3P46736 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.07■□□□□ 0.32
BRCC3P46736 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
BRCC3P46736 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.06■□□□□ 0.32
BRCC3P46736 PCDH8P1-201ENST00000428983 2773 ntBASIC17.06■□□□□ 0.32
BRCC3P46736 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BRCC3P46736 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BRCC3P46736 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.06■□□□□ 0.32
BRCC3P46736 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.06■□□□□ 0.32
BRCC3P46736 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
BRCC3P46736 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.06■□□□□ 0.32
BRCC3P46736 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.06■□□□□ 0.32
BRCC3P46736 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.06■□□□□ 0.32
BRCC3P46736 AC123567.1-201ENST00000548294 1261 ntBASIC17.06■□□□□ 0.32
BRCC3P46736 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.06■□□□□ 0.32
BRCC3P46736 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
BRCC3P46736 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.06■□□□□ 0.32
BRCC3P46736 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BRCC3P46736 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
BRCC3P46736 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
BRCC3P46736 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
BRCC3P46736 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
BRCC3P46736 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
BRCC3P46736 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.06■□□□□ 0.32
BRCC3P46736 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
BRCC3P46736 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
BRCC3P46736 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BRCC3P46736 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
BRCC3P46736 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.05■□□□□ 0.32
BRCC3P46736 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
BRCC3P46736 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms