Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-1P43699 AF228730.7-201ENST00000641842 219 ntBASIC13.28□□□□□ -0.28
NKX2-1P43699 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-1P43699 KRT18P1-202ENST00000452408 1331 ntBASIC13.28□□□□□ -0.28
NKX2-1P43699 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-1P43699 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX2-1P43699 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
NKX2-1P43699 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-1P43699 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
NKX2-1P43699 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
NKX2-1P43699 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-1P43699 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-1P43699 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-1P43699 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
NKX2-1P43699 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-1P43699 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX2-1P43699 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX2-1P43699 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
NKX2-1P43699 AC008677.1-201ENST00000519230 1561 ntBASIC13.28□□□□□ -0.28
NKX2-1P43699 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX2-1P43699 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-1P43699 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-1P43699 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
NKX2-1P43699 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.28□□□□□ -0.28
NKX2-1P43699 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
NKX2-1P43699 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-1P43699 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
NKX2-1P43699 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-1P43699 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-1P43699 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.27□□□□□ -0.28
NKX2-1P43699 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-1P43699 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
NKX2-1P43699 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-1P43699 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-1P43699 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-1P43699 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
NKX2-1P43699 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.27□□□□□ -0.28
NKX2-1P43699 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX2-1P43699 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
NKX2-1P43699 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX2-1P43699 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-1P43699 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-1P43699 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NKX2-1P43699 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.29
NKX2-1P43699 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
NKX2-1P43699 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.27□□□□□ -0.29
NKX2-1P43699 AC064862.7-201ENST00000604520 867 ntBASIC13.27□□□□□ -0.29
NKX2-1P43699 AL139424.1-201ENST00000607572 797 ntBASIC13.27□□□□□ -0.29
NKX2-1P43699 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.27□□□□□ -0.29
NKX2-1P43699 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
NKX2-1P43699 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-1P43699 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-1P43699 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
NKX2-1P43699 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-1P43699 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
NKX2-1P43699 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
NKX2-1P43699 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.27□□□□□ -0.29
NKX2-1P43699 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 CICP24-201ENST00000605464 2705 ntBASIC13.26□□□□□ -0.29
NKX2-1P43699 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
NKX2-1P43699 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-1P43699 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.26□□□□□ -0.29
NKX2-1P43699 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NKX2-1P43699 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
NKX2-1P43699 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-1P43699 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-1P43699 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-1P43699 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.26□□□□□ -0.29
NKX2-1P43699 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
NKX2-1P43699 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms