Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.83■□□□□ 0.28
MTHFRP42898 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MTHFRP42898 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.83■□□□□ 0.28
MTHFRP42898 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.83■□□□□ 0.28
MTHFRP42898 CTBP2P5-201ENST00000454986 1264 ntBASIC16.83■□□□□ 0.28
MTHFRP42898 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MTHFRP42898 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MTHFRP42898 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.83■□□□□ 0.28
MTHFRP42898 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.83■□□□□ 0.28
MTHFRP42898 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MTHFRP42898 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.83■□□□□ 0.28
MTHFRP42898 KRT8P22-201ENST00000562317 1415 ntBASIC16.83■□□□□ 0.28
MTHFRP42898 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.83■□□□□ 0.28
MTHFRP42898 AC036164.1-201ENST00000570544 333 ntBASIC16.83■□□□□ 0.28
MTHFRP42898 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.83■□□□□ 0.28
MTHFRP42898 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.83■□□□□ 0.28
MTHFRP42898 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
MTHFRP42898 MIR6787-201ENST00000616675 61 ntBASIC16.83■□□□□ 0.28
MTHFRP42898 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.83■□□□□ 0.28
MTHFRP42898 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
MTHFRP42898 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MTHFRP42898 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MTHFRP42898 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.83■□□□□ 0.28
MTHFRP42898 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
MTHFRP42898 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MTHFRP42898 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MTHFRP42898 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MTHFRP42898 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MTHFRP42898 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.82■□□□□ 0.28
MTHFRP42898 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.82■□□□□ 0.28
MTHFRP42898 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
MTHFRP42898 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.82■□□□□ 0.28
MTHFRP42898 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.82■□□□□ 0.28
MTHFRP42898 KRT8P44-201ENST00000441609 1350 ntBASIC16.82■□□□□ 0.28
MTHFRP42898 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.82■□□□□ 0.28
MTHFRP42898 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.82■□□□□ 0.28
MTHFRP42898 AL583810.1-201ENST00000553344 1045 ntBASIC16.82■□□□□ 0.28
MTHFRP42898 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.82■□□□□ 0.28
MTHFRP42898 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
MTHFRP42898 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.82■□□□□ 0.28
MTHFRP42898 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.82■□□□□ 0.28
MTHFRP42898 AC133539.2-201ENST00000604757 467 ntBASIC16.82■□□□□ 0.28
MTHFRP42898 AL365330.1-201ENST00000607459 531 ntBASIC16.82■□□□□ 0.28
MTHFRP42898 MIR6869-201ENST00000619434 62 ntBASIC16.82■□□□□ 0.28
MTHFRP42898 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.82■□□□□ 0.28
MTHFRP42898 PCDHB17P-201ENST00000539533 2393 ntBASIC16.82■□□□□ 0.28
MTHFRP42898 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MTHFRP42898 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MTHFRP42898 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MTHFRP42898 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MTHFRP42898 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.82■□□□□ 0.28
MTHFRP42898 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MTHFRP42898 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.81■□□□□ 0.28
MTHFRP42898 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.81■□□□□ 0.28
MTHFRP42898 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.81■□□□□ 0.28
MTHFRP42898 PDIA3P1-201ENST00000471856 1510 ntBASIC16.81■□□□□ 0.28
MTHFRP42898 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
MTHFRP42898 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MTHFRP42898 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.81■□□□□ 0.28
MTHFRP42898 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MTHFRP42898 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
MTHFRP42898 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
MTHFRP42898 AL442647.2-201ENST00000429864 857 ntBASIC16.81■□□□□ 0.28
MTHFRP42898 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.81■□□□□ 0.28
MTHFRP42898 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
MTHFRP42898 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.81■□□□□ 0.28
MTHFRP42898 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.81■□□□□ 0.28
MTHFRP42898 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.81■□□□□ 0.28
MTHFRP42898 AL022328.1-201ENST00000610050 478 ntBASIC16.81■□□□□ 0.28
MTHFRP42898 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.81■□□□□ 0.28
MTHFRP42898 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
MTHFRP42898 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
MTHFRP42898 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
MTHFRP42898 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.8■□□□□ 0.28
MTHFRP42898 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.8■□□□□ 0.28
MTHFRP42898 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 TUBB1P2-201ENST00000422712 1306 ntBASIC16.8■□□□□ 0.28
MTHFRP42898 TUBB1P1-201ENST00000503144 1300 ntBASIC16.8■□□□□ 0.28
MTHFRP42898 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
MTHFRP42898 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
MTHFRP42898 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms