Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
GDNFP39905 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.13□□□□□ -0.15
GDNFP39905 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 TCAF2P1-201ENST00000291129 2421 ntBASIC14.13□□□□□ -0.15
GDNFP39905 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
GDNFP39905 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
GDNFP39905 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
GDNFP39905 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.12□□□□□ -0.15
GDNFP39905 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.12□□□□□ -0.15
GDNFP39905 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.12□□□□□ -0.15
GDNFP39905 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.12□□□□□ -0.15
GDNFP39905 GPAA1P2-202ENST00000606848 1787 ntBASIC14.12□□□□□ -0.15
GDNFP39905 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.12□□□□□ -0.15
GDNFP39905 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GDNFP39905 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
GDNFP39905 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
GDNFP39905 AL450487.1-201ENST00000426799 995 ntBASIC14.12□□□□□ -0.15
GDNFP39905 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 RN7SL510P-201ENST00000581311 263 ntBASIC14.12□□□□□ -0.15
GDNFP39905 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.12□□□□□ -0.15
GDNFP39905 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.12□□□□□ -0.15
GDNFP39905 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
GDNFP39905 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.12□□□□□ -0.15
GDNFP39905 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.12□□□□□ -0.15
GDNFP39905 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.12□□□□□ -0.15
GDNFP39905 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
GDNFP39905 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 AC243591.1-201ENST00000452967 1364 ntBASIC14.11□□□□□ -0.15
GDNFP39905 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.11□□□□□ -0.15
GDNFP39905 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.11□□□□□ -0.15
GDNFP39905 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.11□□□□□ -0.15
GDNFP39905 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GDNFP39905 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.11□□□□□ -0.15
GDNFP39905 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
GDNFP39905 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC14.11□□□□□ -0.15
GDNFP39905 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 NCF1C-201ENST00000438382 1427 ntBASIC14.11□□□□□ -0.15
GDNFP39905 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.11□□□□□ -0.15
GDNFP39905 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDNFP39905 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.11□□□□□ -0.15
GDNFP39905 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
GDNFP39905 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.11□□□□□ -0.15
GDNFP39905 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.11□□□□□ -0.15
GDNFP39905 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms