Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
SYN1P17600 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.35■□□□□ 0.37
SYN1P17600 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SYN1P17600 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SYN1P17600 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
SYN1P17600 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SYN1P17600 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SYN1P17600 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.35■□□□□ 0.37
SYN1P17600 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SYN1P17600 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.35■□□□□ 0.37
SYN1P17600 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SYN1P17600 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SYN1P17600 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
SYN1P17600 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SYN1P17600 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC17.34■□□□□ 0.37
SYN1P17600 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SYN1P17600 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.34■□□□□ 0.37
SYN1P17600 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.34■□□□□ 0.37
SYN1P17600 FTLP1-201ENST00000449155 526 ntBASIC17.34■□□□□ 0.37
SYN1P17600 AC008267.1-201ENST00000474858 1069 ntBASIC17.34■□□□□ 0.37
SYN1P17600 AP001582.1-201ENST00000525856 295 ntBASIC17.34■□□□□ 0.37
SYN1P17600 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.34■□□□□ 0.37
SYN1P17600 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.34■□□□□ 0.37
SYN1P17600 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC17.34■□□□□ 0.37
SYN1P17600 FGFR3P5-201ENST00000564496 886 ntBASIC17.34■□□□□ 0.37
SYN1P17600 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.34■□□□□ 0.37
SYN1P17600 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.34■□□□□ 0.37
SYN1P17600 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
SYN1P17600 AC026740.1-201ENST00000607068 791 ntBASIC17.34■□□□□ 0.37
SYN1P17600 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.34■□□□□ 0.37
SYN1P17600 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.34■□□□□ 0.37
SYN1P17600 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.34■□□□□ 0.37
SYN1P17600 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SYN1P17600 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SYN1P17600 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYN1P17600 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYN1P17600 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYN1P17600 GGT4P-201ENST00000623672 1708 ntBASIC17.33■□□□□ 0.37
SYN1P17600 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYN1P17600 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SYN1P17600 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.33■□□□□ 0.36
SYN1P17600 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SYN1P17600 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
SYN1P17600 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.33■□□□□ 0.36
SYN1P17600 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.33■□□□□ 0.36
SYN1P17600 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.33■□□□□ 0.36
SYN1P17600 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.33■□□□□ 0.36
SYN1P17600 ATP6V0CP2-201ENST00000469409 207 ntBASIC17.33■□□□□ 0.36
SYN1P17600 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 AC134698.3-201ENST00000523880 214 ntBASIC17.33■□□□□ 0.36
SYN1P17600 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.33■□□□□ 0.36
SYN1P17600 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.33■□□□□ 0.36
SYN1P17600 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.33■□□□□ 0.36
SYN1P17600 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC17.33■□□□□ 0.36
SYN1P17600 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SYN1P17600 AP003419.4-201ENST00000616071 517 ntBASIC17.33■□□□□ 0.36
SYN1P17600 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.33■□□□□ 0.36
SYN1P17600 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SYN1P17600 AL139011.1-202ENST00000642063 584 ntBASIC17.33■□□□□ 0.36
SYN1P17600 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 AC068880.1-201ENST00000507289 2297 ntBASIC17.33■□□□□ 0.36
SYN1P17600 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SYN1P17600 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.33■□□□□ 0.36
SYN1P17600 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.33■□□□□ 0.36
SYN1P17600 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SYN1P17600 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
SYN1P17600 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYN1P17600 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.32■□□□□ 0.36
SYN1P17600 AL138688.1-201ENST00000624851 1594 ntBASIC17.32■□□□□ 0.36
SYN1P17600 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SYN1P17600 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC17.32■□□□□ 0.36
SYN1P17600 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms