Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18■□□□□ 0.47
COL11A1P12107 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC18■□□□□ 0.47
COL11A1P12107 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18■□□□□ 0.47
COL11A1P12107 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18■□□□□ 0.47
COL11A1P12107 AC093813.1-201ENST00000605066 256 ntBASIC18■□□□□ 0.47
COL11A1P12107 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18■□□□□ 0.47
COL11A1P12107 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18■□□□□ 0.47
COL11A1P12107 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18■□□□□ 0.47
COL11A1P12107 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18■□□□□ 0.47
COL11A1P12107 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18■□□□□ 0.47
COL11A1P12107 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18■□□□□ 0.47
COL11A1P12107 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
COL11A1P12107 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17.99■□□□□ 0.47
COL11A1P12107 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 AC018695.7-201ENST00000624587 2492 ntBASIC17.99■□□□□ 0.47
COL11A1P12107 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.99■□□□□ 0.47
COL11A1P12107 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.99■□□□□ 0.47
COL11A1P12107 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
COL11A1P12107 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.99■□□□□ 0.47
COL11A1P12107 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.99■□□□□ 0.47
COL11A1P12107 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
COL11A1P12107 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
COL11A1P12107 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.99■□□□□ 0.47
COL11A1P12107 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.99■□□□□ 0.47
COL11A1P12107 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 AP001889.1-201ENST00000525414 633 ntBASIC17.99■□□□□ 0.47
COL11A1P12107 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.99■□□□□ 0.47
COL11A1P12107 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
COL11A1P12107 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.99■□□□□ 0.47
COL11A1P12107 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
COL11A1P12107 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
COL11A1P12107 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 PCDHA12-202ENST00000613593 2588 ntBASIC17.98■□□□□ 0.47
COL11A1P12107 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.98■□□□□ 0.47
COL11A1P12107 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.98■□□□□ 0.47
COL11A1P12107 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
COL11A1P12107 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
COL11A1P12107 CNN2P8-201ENST00000421872 913 ntBASIC17.98■□□□□ 0.47
COL11A1P12107 AC016694.1-201ENST00000434179 700 ntBASIC17.98■□□□□ 0.47
COL11A1P12107 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
COL11A1P12107 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.98■□□□□ 0.47
COL11A1P12107 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.98■□□□□ 0.47
COL11A1P12107 AC025279.2-201ENST00000569730 653 ntBASIC17.98■□□□□ 0.47
COL11A1P12107 BTNL10-201ENST00000595971 695 ntBASIC17.98■□□□□ 0.47
COL11A1P12107 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
COL11A1P12107 NKILA-202ENST00000614771 2598 ntBASIC17.98■□□□□ 0.47
COL11A1P12107 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 TUBB1P2-201ENST00000422712 1306 ntBASIC17.98■□□□□ 0.47
COL11A1P12107 TUBB1P1-201ENST00000503144 1300 ntBASIC17.98■□□□□ 0.47
COL11A1P12107 AC134312.5-201ENST00000568031 1313 ntBASIC17.98■□□□□ 0.47
COL11A1P12107 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.98■□□□□ 0.47
COL11A1P12107 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.98■□□□□ 0.47
COL11A1P12107 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.98■□□□□ 0.47
COL11A1P12107 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.98■□□□□ 0.47
COL11A1P12107 AL583810.1-201ENST00000553344 1045 ntBASIC17.98■□□□□ 0.47
COL11A1P12107 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.98■□□□□ 0.47
COL11A1P12107 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.98■□□□□ 0.47
COL11A1P12107 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.98■□□□□ 0.47
COL11A1P12107 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
COL11A1P12107 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
COL11A1P12107 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.98■□□□□ 0.47
COL11A1P12107 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
COL11A1P12107 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms