Protein–RNA interactions for Protein: P0C6S8

LINGO3, Leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINGO3P0C6S8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 AC026396.1-201ENST00000419388 421 ntBASIC15.7■□□□□ 0.1
LINGO3P0C6S8 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 FAM197Y8-203ENST00000450145 560 ntBASIC15.7■□□□□ 0.1
LINGO3P0C6S8 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 AC064862.7-201ENST00000604520 867 ntBASIC15.7■□□□□ 0.1
LINGO3P0C6S8 AL589182.2-201ENST00000619332 1049 ntBASIC15.7■□□□□ 0.1
LINGO3P0C6S8 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.7■□□□□ 0.1
LINGO3P0C6S8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 REXO1L2P-201ENST00000425429 2069 ntBASIC15.69■□□□□ 0.1
LINGO3P0C6S8 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 AL390755.1-201ENST00000623716 2027 ntBASIC15.69■□□□□ 0.1
LINGO3P0C6S8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 RNPS1P1-201ENST00000507437 918 ntBASIC15.69■□□□□ 0.1
LINGO3P0C6S8 AC073648.2-201ENST00000510116 352 ntBASIC15.69■□□□□ 0.1
LINGO3P0C6S8 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 AL160237.2-201ENST00000556165 472 ntBASIC15.69■□□□□ 0.1
LINGO3P0C6S8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
LINGO3P0C6S8 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms